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Website translation planned

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Compile Time Estimator integrated into genlop

You are here: Portage

Details of sci-biology/pysam:

Description: Python interface for the SAM/BAM sequence alignment and mapping format
Homepage: https://github.com/pysam-developers/pysam https://pypi.org/project/pysam/

available versions:

releases	alpha	amd64	arm	hppa	ia64	mips	ppc	ppc64	ppc macos	s390	sh	sparc	x86	USE-Flags	dependencies	ebuild warnings
pysam-9999	-	-	-	-	-	-	-	-	-	-	-	-	-	none	show	show
pysam-0.22.1	-	~	-	-	-	-	-	-	-	-	-	-	~	none	show	show

Legend:
+ stable
~ testing
- not available
some ebuild warning depend on specific use-flags or architectures, all ebuild-warnings are shown.

Known bugs:
no bugs found.

back

New Packages

- as

- as

2024-10-31

bpftool - 7.4.0

Ebuild name:

dev-util/bpftool-7.4.0

Description

Tool for inspection and simple manipulation of eBPF programs and maps

Added to portage

2024-10-31

bpftool - 9999

Ebuild name:

dev-util/bpftool-9999

Description

Tool for inspection and simple manipulation of eBPF programs and maps

Added to portage

2024-10-31

clang - 19.1.3

Ebuild name:

sys-devel/clang-19.1.3

Description

C language family frontend for LLVM

Added to portage

2024-10-31

clang-common - 19.1.3

Ebuild name:

sys-devel/clang-common-19.1.3

Description

Common files shared between multiple slots of clang

Added to portage

2024-10-31

clang-python - 19.1.3

Ebuild name:

dev-python/clang-python-19.1.3

Description

Python bindings for sys-devel/clang

Added to portage

2024-10-31

clang-runtime - 19.1.3

Ebuild name:

sys-devel/clang-runtime-19.1.3

Description

Meta-ebuild for clang runtime libraries

Added to portage

2024-10-31

compiler-rt - 19.1.3

Ebuild name:

sys-libs/compiler-rt-19.1.3

Description

Compiler runtime library for clang (built-in part)

Added to portage

2024-10-31

compiler-rt-sanitizers - 19.1.3

Ebuild name:

sys-libs/compiler-rt-sanitizers-19.1.3

Description

Compiler runtime libraries for clang (sanitizers & xray)

Added to portage

2024-10-31

epson-inkjet-printer-escpr - 1.8.6

Ebuild name:

net-print/epson-inkjet-printer-escpr-1.8.6

Description

Epson Inkjet Printer Driver (ESC/P-R)

Added to portage

2024-10-31

harfbuzz - 10.0.1

Ebuild name:

media-libs/harfbuzz-10.0.1

Description

An OpenType text shaping engine

Added to portage

2024-10-31

kitty - 0.37.0

Ebuild name:

x11-terms/kitty-0.37.0

Description

Fast, feature-rich, GPU-based terminal

Added to portage

2024-10-31

kitty-shell-integration - 0.37.0

Ebuild name:

x11-terms/kitty-shell-integration-0.37.0

Description

Shell integration scripts for kitty, a GPU-based terminal

Added to portage

2024-10-31

kitty-terminfo - 0.37.0

Ebuild name:

x11-terms/kitty-terminfo-0.37.0

Description

Terminfo for kitty, a GPU-based terminal emulator

Added to portage

2024-10-31

libclc - 19.1.3

Ebuild name:

dev-libs/libclc-19.1.3

Description

OpenCL C library

Added to portage

2024-10-31

libcxx - 19.1.3

Ebuild name:

sys-libs/libcxx-19.1.3

Description

New implementation of the C++ standard library, targeting C++11

Added to portage

2024-10-31

libcxxabi - 19.1.3

Ebuild name:

sys-libs/libcxxabi-19.1.3

Description

Low level support for a standard C++ library

Added to portage

2024-10-31

libomp - 19.1.3

Ebuild name:

sys-libs/libomp-19.1.3

Description

OpenMP runtime library for LLVM/clang compiler

Added to portage

2024-10-31

libssh - 0.11.1

Ebuild name:

net-libs/libssh-0.11.1

Description

Access a working SSH implementation by means of a library

Added to portage

2024-10-31

lit - 19.1.3

Ebuild name:

dev-python/lit-19.1.3

Description

A stand-alone install of the LLVM suite testing tool

Added to portage

2024-10-31

lld - 19.1.3

Ebuild name:

sys-devel/lld-19.1.3

Description

The LLVM linker (link editor)

Added to portage

2024-10-31

lldb - 19.1.3

Ebuild name:

dev-debug/lldb-19.1.3

Description

The LLVM debugger

Added to portage

2024-10-31

llvm - 19.1.3

Ebuild name:

sys-devel/llvm-19.1.3

Description

Low Level Virtual Machine

Added to portage

2024-10-31

llvm-common - 19.1.3

Ebuild name:

sys-devel/llvm-common-19.1.3

Description

Common files shared between multiple slots of LLVM

Added to portage

2024-10-31

llvm-libunwind - 19.1.3

Ebuild name:

sys-libs/llvm-libunwind-19.1.3

Description

C++ runtime stack unwinder from LLVM

Added to portage

2024-10-31

llvm-ocaml - 19.1.3

Ebuild name:

dev-ml/llvm-ocaml-19.1.3

Description

OCaml bindings for LLVM

Added to portage

2024-10-31

puppet-mode - 0.4

Ebuild name:

app-emacs/puppet-mode-0.4

Description

Emacs major mode for editing Puppet manifests

Added to portage

2024-10-31

pymacs - 0.26-r5

Ebuild name:

app-emacs/pymacs-0.26-r5

Description

A tool that allows both-side communication between Python and Emacs Lisp

Added to portage

2024-10-31

python-mode - 6.3.0

Ebuild name:

app-emacs/python-mode-6.3.0

Description

An Emacs major mode for editing Python source

Added to portage

2024-10-31

pyvenv - 1.21

Ebuild name:

app-emacs/pyvenv-1.21

Description

Python virtual environment interface for Emacs

Added to portage

2024-10-31

qemu - 9.1.1

Ebuild name:

app-emulation/qemu-9.1.1

Description

QEMU + Kernel-based Virtual Machine userland tools

Added to portage

2024-10-31

sc-controller - 0.4.8.21

Ebuild name:

games-util/sc-controller-0.4.8.21

Description

User-mode driver and GTK-based GUI for Steam Controllers and othe

Added to portage

2024-10-31

vivaldi-snapshot - 7.1.3510.4

Ebuild name:

www-client/vivaldi-snapshot-7.1.3510.4

Description

A browser for our friends

Added to portage

2024-10-31

2024-10-30

awscli - 1.35.17

Ebuild name:

app-admin/awscli-1.35.17

Description

Universal Command Line Environment for AWS

Added to portage

2024-10-30

batik - 1.18

Ebuild name:

dev-java/batik-1.18

Description

XML Graphics Batik

Added to portage

2024-10-30

bleach - 6.2.0

Ebuild name:

dev-python/bleach-6.2.0

Description

An easy whitelist-based HTML-sanitizing tool

Added to portage

2024-10-30

boto3 - 1.35.51

Ebuild name:

dev-python/boto3-1.35.51

Description

The AWS SDK for Python

Added to portage

2024-10-30

botocore - 1.35.51

Ebuild name:

dev-python/botocore-1.35.51

Description

Low-level, data-driven core of boto 3

Added to portage

2024-10-30

braintree - 4.31.0

Ebuild name:

dev-python/braintree-4.31.0

Description

Braintree Python Library

Added to portage

2024-10-30

chrome-binary-plugins - 130.0.6723.91

Ebuild name:

www-plugins/chrome-binary-plugins-130.0.6723.91

Description

Binary plugins from Google Chrome for use in Chromi

Added to portage

2024-10-30

chrome-binary-plugins - 132.0.6793.2_alpha

Ebuild name:

www-plugins/chrome-binary-plugins-132.0.6793.2_alpha

Description

Binary plugins from Google Chrome for use in C

Added to portage

2024-10-30

chromedriver-bin - 130.0.6723.91

Ebuild name:

www-apps/chromedriver-bin-130.0.6723.91

Description

WebDriver for Chrome

Added to portage

2024-10-30

clang - 18.1.8-r6

Ebuild name:

sys-devel/clang-18.1.8-r6

Description

C language family frontend for LLVM

Added to portage

2024-10-30

cmus - 2.12.0

Ebuild name:

media-sound/cmus-2.12.0

Description

Ncurses based music player with plugin support for many formats

Added to portage

2024-10-30

colorlog - 6.9.0

Ebuild name:

dev-python/colorlog-6.9.0

Description

Log formatting with colors

Added to portage

2024-10-30

compiler-rt-sanitizers - 18.1.8-r6

Ebuild name:

sys-libs/compiler-rt-sanitizers-18.1.8-r6

Description

Compiler runtime libraries for clang (sanitizers & xray)

Added to portage

2024-10-30

croniter - 5.0.1

Ebuild name:

dev-python/croniter-5.0.1

Description

Python module to provide iteration for datetime object

Added to portage

2024-10-30

debugedit - 5.1-r1

Ebuild name:

dev-util/debugedit-5.1-r1

Description

Create debuginfo and source file distributions

Added to portage

2024-10-30

desktop-file-utils - 0.28

Ebuild name:

dev-util/desktop-file-utils-0.28

Description

Command line utilities to work with desktop menu entries

Added to portage

2024-10-30

django-cors-headers - 4.6.0

Ebuild name:

dev-python/django-cors-headers-4.6.0

Description

Django App that adds CORS (Cross-Origin Resource Sharing) head

Added to portage

2024-10-30

docker - 27.3.1

Ebuild name:

app-containers/docker-27.3.1

Description

The core functions you need to create Docker images and run Docker con

Added to portage

2024-10-30

docker-cli - 27.3.1

Ebuild name:

app-containers/docker-cli-27.3.1

Description

the command line binary for docker

Added to portage

2024-10-30

dry-core - 1.0.2

Ebuild name:

dev-ruby/dry-core-1.0.2

Description

A toolset of small support modules used throughout the dry-rb ecosystem

Added to portage

2024-10-30

ensurepip-setuptools - 75.3.0

Ebuild name:

dev-python/ensurepip-setuptools-75.3.0

Description

Shared setuptools wheel for ensurepip Python module

Added to portage

2024-10-30

fantomas - 6.3.16

Ebuild name:

dev-dotnet/fantomas-6.3.16

Description

FSharp source code formatter

Added to portage

2024-10-30

fop - 2.10

Ebuild name:

dev-java/fop-2.10

Description

XML Graphics Format Object Processor All-In-One

Added to portage

2024-10-30

geomyidae - 0.96

Ebuild name:

net-misc/geomyidae-0.96

Description

A daemon to serve the gopher protocol

Added to portage

2024-10-30

git-pw - 2.7.0

Ebuild name:

dev-vcs/git-pw-2.7.0

Description

A tool for integrating Git with Patchwork

Added to portage

2024-10-30

google-chrome - 130.0.6723.91

Ebuild name:

www-client/google-chrome-130.0.6723.91

Description

The web browser from Google

Added to portage

2024-10-30

google-chrome-unstable - 132.0.6793.2

Ebuild name:

www-client/google-chrome-unstable-132.0.6793.2

Description

The web browser from Google

Added to portage

2024-10-30

gtk-layer-shell - 0.9.0

Ebuild name:

gui-libs/gtk-layer-shell-0.9.0

Description

Library to create desktop components for Wayland using the Layer She

Added to portage

2024-10-30

hydrogen - 1.2.3

Ebuild name:

media-sound/hydrogen-1.2.3

Description

Advanced drum machine

Added to portage

2024-10-30

hypothesis - 6.115.6

Ebuild name:

dev-python/hypothesis-6.115.6

Description

A library for property based testing

Added to portage

2024-10-30

jna - 5.15.0

Ebuild name:

dev-java/jna-5.15.0

Description

Java Native Access

Added to portage

2024-10-30

kombu - 5.5.0_rc2

Ebuild name:

dev-python/kombu-5.5.0_rc2

Description

AMQP Messaging Framework for Python

Added to portage

2024-10-30

libprojectm - 4.1.2

Ebuild name:

media-libs/libprojectm-4.1.2

Description

A graphical music visualization plugin similar to milkdrop

Added to portage

2024-10-30

libproxy - 0.5.9

Ebuild name:

net-libs/libproxy-0.5.9

Description

Library for automatic proxy configuration management

Added to portage

2024-10-30

libwacom - 2.13.0

Ebuild name:

dev-libs/libwacom-2.13.0

Description

Library for identifying Wacom tablets and their model-specific features

Added to portage

2024-10-30

llvm - 18.1.8-r6

Ebuild name:

sys-devel/llvm-18.1.8-r6

Description

Low Level Virtual Machine

Added to portage

2024-10-30

microsoft-edge - 130.0.2849.56

Ebuild name:

www-client/microsoft-edge-130.0.2849.56

Description

The web browser from Microsoft

Added to portage

2024-10-30

microsoft-edge-beta - 131.0.2903.14

Ebuild name:

www-client/microsoft-edge-beta-131.0.2903.14

Description

The web browser from Microsoft

Added to portage

2024-10-30

microsoft-edge-beta - 131.0.2903.9

Ebuild name:

www-client/microsoft-edge-beta-131.0.2903.9

Description

The web browser from Microsoft

Added to portage

2024-10-30

opera-developer - 116.0.5335.0

Ebuild name:

www-client/opera-developer-116.0.5335.0

Description

A fast and secure web browser

Added to portage

2024-10-30

postfix - 3.10_pre20241027

Ebuild name:

mail-mta/postfix-3.10_pre20241027

Description

A fast and secure drop-in replacement for sendmail

Added to portage

2024-10-30

pyasn1 - 0.6.1

Ebuild name:

dev-python/pyasn1-0.6.1

Description

ASN.1 library for Python

Added to portage

2024-10-30

pyasn1-modules - 0.4.1

Ebuild name:

dev-python/pyasn1-modules-0.4.1

Description

pyasn1 modules

Added to portage

2024-10-30

pyphen - 0.17.0

Ebuild name:

dev-python/pyphen-0.17.0

Description

Python module for hyphenation using hunspell dictionaries

Added to portage

2024-10-30

pysmi - 1.5.6

Ebuild name:

dev-python/pysmi-1.5.6

Description

Pure-Python implementation of SNMP/SMI MIB parsing and conversion library

Added to portage

2024-10-30

python-openstackclient - 7.2.1

Ebuild name:

dev-python/python-openstackclient-7.2.1

Description

A client for the OpenStack APIs

Added to portage

2024-10-30

qjackctl - 1.0.3

Ebuild name:

media-sound/qjackctl-1.0.3

Description

Qt GUI to control the JACK Audio Connection Kit and ALSA sequencer conne

Added to portage

2024-10-30

quack - 0.48

Ebuild name:

app-emacs/quack-0.48

Description

Enhances Emacs support for Scheme

Added to portage

2024-10-30

queue - 0.2

Ebuild name:

app-emacs/queue-0.2

Description

Queue data structure

Added to portage

2024-10-30

quilt-el - 0.66

Ebuild name:

app-emacs/quilt-el-0.66

Description

Quilt mode for Emacs

Added to portage

2024-10-30

qwerty - 1.1

Ebuild name:

app-emacs/qwerty-1.1

Description

Switch between QWERTY and DVORAK without changing the console keymap

Added to portage

2024-10-30

ruby-prof - 1.7.1

Ebuild name:

dev-ruby/ruby-prof-1.7.1

Description

A module for profiling Ruby code

Added to portage

2024-10-30

s3fs - 1.95

Ebuild name:

net-fs/s3fs-1.95

Description

Amazon S3 mounting via fuse

Added to portage

2024-10-30

sdbus-c++ - 2.0.0

Ebuild name:

dev-cpp/sdbus-c++-2.0.0

Description

High-level C++ D-Bus library

Added to portage

2024-10-30

setuptools - 75.3.0

Ebuild name:

dev-python/setuptools-75.3.0

Description

Collection of extensions to Distutils

Added to portage

2024-10-30

simsimd - 5.9.6

Ebuild name:

dev-python/simsimd-5.9.6

Description

Fastest SIMD-Accelerated Vector Similarity Functions for x86 and Arm

Added to portage

2024-10-30

soju - 0.8.2-r1

Ebuild name:

net-irc/soju-0.8.2-r1

Description

soju is a user-friendly IRC bouncer

Added to portage

2024-10-30

sourcegit - 8.36

Ebuild name:

dev-vcs/sourcegit-8.36

Description

Open Source Git GUI client using .NET AvaloniaUI

Added to portage

2024-10-30

stripe - 11.2.0

Ebuild name:

dev-python/stripe-11.2.0

Description

Stripe Python bindings

Added to portage

2024-10-30

synapse - 1.114.0-r2

Ebuild name:

net-im/synapse-1.114.0-r2

Description

Reference implementation of Matrix homeserver

Added to portage

2024-10-30

synapse - 1.116.0-r3

Ebuild name:

net-im/synapse-1.116.0-r3

Description

Reference implementation of Matrix homeserver

Added to portage

2024-10-30

synapse - 1.116.0-r4

Ebuild name:

net-im/synapse-1.116.0-r4

Description

Reference implementation of Matrix homeserver

Added to portage

2024-10-30

synapse - 1.118.0

Ebuild name:

net-im/synapse-1.118.0

Description

Reference implementation of Matrix homeserver

Added to portage

2024-10-30

thunderbird - 128.4.0

Ebuild name:

mail-client/thunderbird-128.4.0

Description

Thunderbird Mail Client

Added to portage

2024-10-30

thunderbird-bin - 128.4.0

Ebuild name:

mail-client/thunderbird-bin-128.4.0

Description

Thunderbird Mail Client

Added to portage

2024-10-30

tinyhtml5 - 2.0.0

Ebuild name:

dev-python/tinyhtml5-2.0.0

Description

HTML parser based on the WHATWG HTML specification

Added to portage

2024-10-30

vmpk - 0.9.0

Ebuild name:

media-sound/vmpk-0.9.0

Description

Virtual MIDI Piano Keyboard

Added to portage

2024-10-30

weasyprint - 63.0

Ebuild name:

dev-python/weasyprint-63.0

Description

Visual rendering engine for HTML and CSS that can export to PDF

Added to portage

2024-10-30

x42-plugins - 20240611

Ebuild name:

media-plugins/x42-plugins-20240611

Description

Collection of LV2 plugins

Added to portage

2024-10-30

xf86-input-wacom - 1.2.3

Ebuild name:

x11-drivers/xf86-input-wacom-1.2.3

Description

Driver for Wacom tablets and drawing devices

Added to portage

2024-10-30

xorg-server - 21.1.14

Ebuild name:

x11-base/xorg-server-21.1.14

Description

X.Org X servers

Added to portage

2024-10-30

xwayland - 24.1.4

Ebuild name:

x11-base/xwayland-24.1.4

Description

Standalone X server running under Wayland

Added to portage

2024-10-30

zenlib - 2.3.2

Ebuild name:

dev-python/zenlib-2.3.2

Description

Useful python decorators and utilities

Added to portage

2024-10-30

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