from small one page howto to huge articles all in one place

search text in:




Other .linuxhowtos.org sites: www.linuxhowtos.org
toolsntoys.linuxhowtos.org



Last additions:
How to make X listen on port 6000

How to make X listen on port 6000

words:

34

views:

87968

userrating:

average rating: 1.2 (52 votes) (1=very good 6=terrible)


May, 25th 2007:
April, 26th 2007:
Apr, 10th. 2007:
Druckversion . pdf icon
You are here: Portage


Details of dev-haskell/bio:

available versions:

releasesalphaamd64armhppaia64mipsppcppc64ppc macoss390shsparcx86USE-Flagsdependenciesebuild warnings
Legend:
+ stable
~ testing
- not available
some ebuild warning depend on specific use-flags or architectures, all ebuild-warnings are shown.

Known bugs:
bug IDcomponentassigned tostatusdescriptionlast change
366975ApplicationssciUNCONFIRMED[science overlay] sci-biology/gbrowse-2.33 fails to install, due to ACCESS VIOLATION2012-01-04 08:07:11
368473Applicationssci-biologyUNCONFIRMEDsci-biology/hmmer-3.0 fails to build with "mpi.c:27:23: error: impl_dummy.: No such file or director2011-06-21 09:31:43
377079ApplicationsmmokrejsUNCONFIRMEDsci-biology/GBrowse-2.39 fails to compile2011-08-02 20:22:32
380105Core systempolynomial-cUNCONFIRMEDsys-libs/libsmbios - insecure RUNPATHs:/usr/sbin/smbios-sys-info-lite2011-08-25 12:50:02
382321Applicationssci-biologyUNCONFIRMEDsci-biology/emboss-6.3 runtime functionality missing2011-09-09 23:18:48
383659ApplicationssciUNCONFIRMED[science overlay] sci-biology/emboss-6.4 version bump2012-02-24 18:29:22
383789Applicationssci-biologyUNCONFIRMEDsci-biology/ncbi-tools++-2010.06.15-r1: libmzXML.so: undefined reference to `ncbi::CMemberInfo::SetN2013-02-17 08:11:13
389765Applicationssci-biologyUNCONFIRMEDsci-biology/unafold - add graphic capabilities of mfold_utils2013-02-17 08:24:03
393311Ebuildssci-biologyUNCONFIRMEDsci-biology/emboss-6.0.1 does not respect CFLAGS="-O?"2012-02-02 17:39:58
395891ApplicationssciUNCONFIRMED[science overlay] sci-biology/embassy-memenew-4.0.0-r1 fails to fetch embassy-memenew-4.0.0-r1.tar.g2012-02-20 14:34:30
396091ApplicationssciUNCONFIRMED[science-overlay] dev-perl/Bio-BigFile-1.06 fails to emerge because of relocation problem2012-01-01 08:50:47
396657ApplicationssciUNCONFIRMED[science-overlay] dev-perl/Bio-BigFile-1.06 fails to emerge due to missing jkweb.a2012-02-11 16:02:44
401943Applicationssci-biologyUNCONFIRMEDsci-biology/transfac-3.2 - tfextract segmentation fault in 0x00007f5df6cc4487 in ajStrDel (Pstr=0x72012-02-04 17:26:44
402835Applicationssci-biologyUNCONFIRMEDsci-biology/ucsc-genome-browser: add -fPIC to CFLAGS and USE=+static-libs2013-02-17 08:24:19
402849Applicationssci-biologyUNCONFIRMEDsci-biology/GBrowse: add USE="chado" and its dependencies2013-02-17 08:26:23
404249ApplicationssciUNCONFIRMED[science overlay] sci-biology/embassy-6.3.1 multiple slot conflicts.2012-02-20 14:33:49
405035Applicationssci-biologyUNCONFIRMED[science overlay] sci-biology/embassy-6.3.1 fails to emerge because of dependency on embassy-domaina2012-02-20 14:33:45
406279Applicationssci-biologyUNCONFIRMEDsci-biology/emboss-6.3.1_p4 - add dependency on sci-libs/plplot?2012-02-29 16:17:32
418625Applicationssci-biologyUNCONFIRMEDsci-biology/gatk-1.5: error: name clash: sum(Collection) and sum(Collection) have t2013-02-17 08:28:02
422643ApplicationsgraphicsUNCONFIRMEDmedia-gfx/graphviz-2.28.0 sci-biology/phrap-1.080812 - file collision in /usr/bin/cluster2012-06-21 14:28:59
435270LibraryproaudioUNCONFIRMEDmedia-libs/aubio-0.3.2-r1 - SyntaxError: ('invalid syntax', ('/usr/lib64/python2.7/site-packages/aub2012-09-17 11:44:31
442326ApplicationsqemuUNCONFIRMEDsys-firmware/sgabios-0.1_pre8 - Compile phase failure - ld: i386:x86-64 architecture of input file `2012-11-08 10:43:27
448124DevelopmenttoolchainUNCONFIRMEDsys-devel-gcc-4.5.3: internal compiler error on sci-biology/ncbi-tools++-9.0.0/work/ncbi_cxx--9_0_0/2012-12-26 17:28:43
450322Applicationssci-biologyUNCONFIRMEDsci-biology/mira-3.4.0.2 - libtool: Version mismatch error. This is libtool 2.4, but the definition2013-02-17 09:09:47
453156ApplicationscardoeUNCONFIRMEDsys-firmware/seabios-1.7.2 version bump2013-01-29 12:28:45
456292OthertenUNCONFIRMEDLiveDVD 20121221: Kernel cannot detect BIOS RAID array2013-02-10 06:48:14


back



Support us on Content Nation

New Packages

- as rdf newsfeed
- as rss newsfeed
- as Atom newsfeed
2026-08-27
cargo-c - 0.10.25
Ebuild name:

dev-util/cargo-c-0.10.25

Description

Helper program to build and install c-like libraries

Added to portage

2026-08-27

paraview - 6.1.1
Ebuild name:

sci-visualization/paraview-6.1.1

Description

Powerful scientific data visualization application

Added to portage

2026-08-27

spotify - 1.2.96
Ebuild name:

media-sound/spotify-1.2.96

Description

Spotify is a social music platform

Added to portage

2026-08-27

systemd - 261.2
Ebuild name:

sys-apps/systemd-261.2

Description

System and service manager for Linux

Added to portage

2026-08-27

tor - 0.4.9.11-r1
Ebuild name:

net-vpn/tor-0.4.9.11-r1

Description

Anonymizing overlay network for TCP

Added to portage

2026-08-27

2026-08-26
acr38u - 1.7.11-r5
Ebuild name:

app-crypt/acr38u-1.7.11-r5

Description

Non CCID driver for ACR38 AC1038-based Smart Card Reader

Added to portage

2026-08-26

b4 - 0.16.0-r1
Ebuild name:

net-mail/b4-0.16.0-r1

Description

Utility for fetching patchsets from public-inbox

Added to portage

2026-08-26

boto3 - 1.43.80
Ebuild name:

dev-python/boto3-1.43.80

Description

The AWS SDK for Python

Added to portage

2026-08-26

botocore - 1.43.80
Ebuild name:

dev-python/botocore-1.43.80

Description

Low-level, data-driven core of boto 3

Added to portage

2026-08-26

cmd2 - 4.2.2
Ebuild name:

dev-python/cmd2-4.2.2

Description

Extra features for standard library's cmd module

Added to portage

2026-08-26

cramjam - 2.12.1
Ebuild name:

dev-python/cramjam-2.12.1

Description

Thin Python bindings to de/compression algorithms in Rust

Added to portage

2026-08-26

cryptography - 50.0.1
Ebuild name:

dev-python/cryptography-50.0.1

Description

Library providing cryptographic recipes and primitives

Added to portage

2026-08-26

firefox - 154.0.1
Ebuild name:

www-client/firefox-154.0.1

Description

Firefox Web Browser

Added to portage

2026-08-26

firefox-bin - 154.0.1
Ebuild name:

www-client/firefox-bin-154.0.1

Description

Firefox Web Browser

Added to portage

2026-08-26

firefox-l10n - 154.0.1
Ebuild name:

www-client/firefox-l10n-154.0.1

Description

Firefox Web Browser's translation files

Added to portage

2026-08-26

freerdp - 3.31.0
Ebuild name:

net-misc/freerdp-3.31.0

Description

Free implementation of the Remote Desktop Protocol

Added to portage

2026-08-26

gitpython - 3.1.60
Ebuild name:

dev-python/gitpython-3.1.60

Description

Library used to interact with Git repositories

Added to portage

2026-08-26

glibc - 2.43-r4
Ebuild name:

sys-libs/glibc-2.43-r4

Description

GNU libc C library

Added to portage

2026-08-26

glibc - 2.44-r2
Ebuild name:

sys-libs/glibc-2.44-r2

Description

GNU libc C library

Added to portage

2026-08-26

google-api-core - 2.35.0
Ebuild name:

dev-python/google-api-core-2.35.0

Description

Core Library for Google Client Libraries

Added to portage

2026-08-26

google-auth - 2.57.0
Ebuild name:

dev-python/google-auth-2.57.0

Description

Google Authentication Library

Added to portage

2026-08-26

google-auth-httplib2 - 0.4.2
Ebuild name:

dev-python/google-auth-httplib2-0.4.2

Description

httplib2 Transport for Google Auth

Added to portage

2026-08-26

google-auth-oauthlib - 1.4.1
Ebuild name:

dev-python/google-auth-oauthlib-1.4.1

Description

Google Authentication Library

Added to portage

2026-08-26

googleapis-common-protos - 1.75.2
Ebuild name:

dev-python/googleapis-common-protos-1.75.2

Description

Python classes generated from the common protos in the g

Added to portage

2026-08-26

gpxsee - 16.13
Ebuild name:

sci-geosciences/gpxsee-16.13

Description

Viewer and analyzer that supports gpx, tcx, kml, fit, igc and nmea fil

Added to portage

2026-08-26

gssapi - 1.12.0
Ebuild name:

dev-python/gssapi-1.12.0

Description

Low and high level wrappers around the GSSAPI C libraries

Added to portage

2026-08-26

jupyterlab-desktop-bin - 4.6.3.1
Ebuild name:

sci-misc/jupyterlab-desktop-bin-4.6.3.1

Description

JupyterLab desktop application, based on Electron

Added to portage

2026-08-26

libmd - 1.1.0
Ebuild name:

app-crypt/libmd-1.1.0

Description

Message Digest functions from BSD systems

Added to portage

2026-08-26

nbd - 3.27.1
Ebuild name:

sys-block/nbd-3.27.1

Description

Userland client/server for kernel network block device

Added to portage

2026-08-26

nsd - 4.15.1
Ebuild name:

net-dns/nsd-4.15.1

Description

An authoritative only, high performance, open source name server

Added to portage

2026-08-26

openrgb - 1.0_rc3_p1
Ebuild name:

app-misc/openrgb-1.0_rc3_p1

Description

Open source RGB lighting control

Added to portage

2026-08-26

pbr - 7.1.2
Ebuild name:

dev-python/pbr-7.1.2

Description

Inject some useful and sensible default behaviors into setuptools

Added to portage

2026-08-26

pbs-installer - 2026.8.25
Ebuild name:

dev-python/pbs-installer-2026.8.25

Description

Installer for Python Build Standalone

Added to portage

2026-08-26

plotly - 7.0.0
Ebuild name:

dev-python/plotly-7.0.0

Description

Browser-based graphing library for Python

Added to portage

2026-08-26

portalocker - 4.3.0
Ebuild name:

dev-python/portalocker-4.3.0

Description

A library for Python file locking

Added to portage

2026-08-26

proto-plus - 1.28.4
Ebuild name:

dev-python/proto-plus-1.28.4

Description

Beautiful, Pythonic protocol buffers

Added to portage

2026-08-26

pydata-sphinx-theme - 0.21.0
Ebuild name:

dev-python/pydata-sphinx-theme-0.21.0

Description

Bootstrap-based Sphinx theme from the PyData community

Added to portage

2026-08-26

tex4ht - 20240311_p72882-r5
Ebuild name:

dev-tex/tex4ht-20240311_p72882-r5

Description

Converts (La)TeX to (X)HTML, XML and OO.org

Added to portage

2026-08-26

thunderbird-bin - 140.14.1
Ebuild name:

mail-client/thunderbird-bin-140.14.1

Description

Thunderbird Mail Client

Added to portage

2026-08-26

tox - 4.60.1
Ebuild name:

dev-python/tox-4.60.1

Description

virtualenv-based automation of test activities

Added to portage

2026-08-26

urwid - 4.0.13
Ebuild name:

dev-python/urwid-4.0.13

Description

Curses-based user interface library for Python

Added to portage

2026-08-26

uv - 0.12.6
Ebuild name:

dev-python/uv-0.12.6

Description

A Python package installer and resolver, written in Rust

Added to portage

2026-08-26

uv-build - 0.12.6
Ebuild name:

dev-python/uv-build-0.12.6

Description

PEP517 uv build backend

Added to portage

2026-08-26

virtualenv - 21.7.5
Ebuild name:

dev-python/virtualenv-21.7.5

Description

Virtual Python Environment builder

Added to portage

2026-08-26

rdf newsfeed | rss newsfeed | Atom newsfeed
Copyright 2004-2025 Sascha Nitsch Unternehmensberatung GmbH
- Copyright and legal notices -
Time to create this page: 23.3 ms